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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009027 chr22:47289785 C/T PPIL2 chr22:22020298-22054304:+ -0.86 -9.65 3.07E-20 Box Plot
THCA rs6009027 chr22:47289785 C/T RAB36 chr22:23487513-23506537:+ -0.65 -5.93 5.67E-9 Box Plot
THCA rs6009027 chr22:47289785 C/T RABL2B chr22:51205929-51222091:- -0.6 -6.32 5.84E-10 Box Plot
THCA rs6009027 chr22:47289785 C/T RBM9 chr22:36134784-36424585:- -0.59 -8.67 6.56E-17 Box Plot
THCA rs6009027 chr22:47289785 C/T RBX1 chr22:41347351-41369313:+ -0.59 -8.88 1.36E-17 Box Plot
THCA rs6009027 chr22:47289785 C/T RHBDD3 chr22:29655841-29664198:- -0.64 -8.1 4.76E-15 Box Plot
THCA rs6009027 chr22:47289785 C/T RNF185 chr22:31556169-31603005:+ -0.77 -8.19 2.42E-15 Box Plot
THCA rs6009027 chr22:47289785 C/T RNF215 chr22:30764800-30817760:- -0.72 -8.49 2.55E-16 Box Plot
THCA rs6009027 chr22:47289785 C/T RPL3 chr22:39708887-39716394:- -0.69 -7.55 2.19E-13 Box Plot
THCA rs6009027 chr22:47289785 C/T RPS19BP1 chr22:39925098-39928860:- -0.54 -8.16 2.89E-15 Box Plot
THCA rs6009027 chr22:47289785 C/T SAMM50 chr22:44351301-44406411:+ -0.62 -7.06 6.05E-12 Box Plot
THCA rs6009027 chr22:47289785 C/T SAPS2 chr22:50781760-50883514:+ -0.74 -7.4 6.01E-13 Box Plot
THCA rs6009027 chr22:47289785 C/T SCO2 chr22:50961997-50964868:- -0.39 -6.13 1.81E-9 Box Plot
THCA rs6009027 chr22:47289785 C/T SELO chr22:50639408-50656045:+ -0.53 -7.32 1.09E-12 Box Plot
THCA rs6009027 chr22:47289785 C/T SF3A1 chr22:30727977-30752936:- -0.56 -7.4 6.11E-13 Box Plot